Gene: AT3G16130
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G16130
- Transcript Identifier AT3G16130.1
- Gene Type Coding gene
- Location Chr3 : 5466246-5468512 : positive
Gene Family Information
- ID HOM05D000346
- #Genes/#Species 1367/97
- Phylogenetic origin
- ID ORTHO05D000326
- #Genes/#Species 1104/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G16130.1
- symbol ROPGEF13
- Alias ATROPGEF13,PIRF2,phytochrome interacting RopGEF 2
- full_name ROP (rho of plants) guanine nucleotide exchange factor 13
- uniprot F4J1G1
Descriptions
- Description RHO guanyl-nucleotide exchange factor 13
- Computational description RHO guanyl-nucleotide exchange factor 13 (ROPGEF13); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 11 (TAIR:AT1G52240.1); Has 315 Blast hits to 313 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 0; Plants - 304; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0050790 | IEA | GOA Database | regulation of catalytic activity |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005085 | IEA | GOA Database | guanyl-nucleotide exchange factor activity | |
| GO:0005085 | ISS | Gene Ontology | guanyl-nucleotide exchange factor activity | 1 |
| GO:0005085 | IEA | InterPro | guanyl-nucleotide exchange factor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 27.4.3.1 | Multi-process regulation.Rop-GTPase regulatory system.RopGEF guanine nucleotide exchange factor activities.exchange factor (PRONE) |