Gene: AT3G15640
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G15640
- Transcript Identifier AT3G15640.1
- Gene Type Coding gene
- Location Chr3 : 5299273-5301371 : positive
Gene Family Information
- ID HOM05D002755
- #Genes/#Species 251/96
- Phylogenetic origin
- ID ORTHO05D002910
- #Genes/#Species 255/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G15640.1
- uniprot Q9LW15
Descriptions
- Description Rubredoxin-like superfamily protein
- Computational description Rubredoxin-like superfamily protein; FUNCTIONS IN: cytochrome-c oxidase activity, cobalt ion binding, zinc ion binding, metal ion binding; LOCATED IN: mitochondrial envelope, mitochondrion, chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit Vb (InterPro:IPR002124); BEST Arabidopsis thaliana protein match is: Rubredoxin-like superfamily protein (TAIR:AT1G80230.1); Has 469 Blast hits to 469 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 236; Fungi - 89; Plants - 104; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006123 | IBA IEA | Gene Ontology | mitochondrial electron transport, cytochrome c to oxygen | 1 |
| GO:0006123 | IEA | InterPro | mitochondrial electron transport, cytochrome c to oxygen |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0046872 | IDA | Gene Ontology | metal ion binding | 2 |
| GO:0008270 | IDA | GOA Database | zinc ion binding | |
| GO:0008270 | HDA | Gene Ontology | zinc ion binding | 3 |
| GO:0050897 | IDA | GOA Database | cobalt ion binding | |
| GO:0050897 | HDA | Gene Ontology | cobalt ion binding | 3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005743 | IEA | GOA Database | mitochondrial inner membrane | |
| GO:0005751 | IEA | Gene Ontology | mitochondrial respiratory chain complex IV | |
| GO:0005751 | IEA | InterPro | mitochondrial respiratory chain complex IV | |
| GO:0005740 | IEA | GOA Database | mitochondrial envelope | |
| GO:0005740 | IEA | InterPro | mitochondrial envelope | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0005739 | IDA, HDA ISM | Gene Ontology | mitochondrion | 2 4 |
| GO:0009535 | IDA | GOA Database | chloroplast thylakoid membrane | |
| GO:0009535 | HDA | Gene Ontology | chloroplast thylakoid membrane | 5 |
| GO:0005829 | HDA | Gene Ontology | cytosol | 6 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 2.4.5.1.4 | Cellular respiration.oxidative phosphorylation.cytochrome c oxidase complex.core components.component COX5b |