Gene: AT3G15580

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G15580
  • Transcript Identifier AT3G15580.1
  • Gene Type Coding gene
  • Location Chr3 : 5274075-5275000 : negative

Gene Family Information

  • ID HOM05D000698
  • #Genes/#Species 816/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G15580.1
  • symbol APG8H
  • Alias ATG8I,AUTOPHAGY 8I
  • full_name AUTOPHAGY 8H
  • uniprot Q9LRP7

Descriptions

  • Description Ubiquitin-like superfamily protein
  • Computational description AUTOPHAGY 8H (APG8H); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G06420.1); Has 1501 Blast hits to 1499 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 719; Fungi - 178; Plants - 302; Viruses - 3; Other Eukaryotes - 299 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
GOA Databaseprotein transport
GO:0006914
IEA
GOA Databaseautophagy
GO:0006914
ISS
Gene Ontologyautophagy1
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006995
IBA
Gene Ontologycellular response to nitrogen starvation2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0019786
ISS
Gene OntologyAtg8-specific protease activity1
GO:0019779
ISS
Gene OntologyAtg8 activating enzyme activity1
GO:0019776
ISS
Gene OntologyAtg8 ligase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
NAS
Gene Ontologycytoplasm
GO:0016020
IEA
GOA Databasemembrane
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0005874
IEA
GOA Databasemicrotubule
GO:0005773
IEA
GOA Databasevacuole
GO:0000421
IEA
GOA Databaseautophagosome membrane
GO:0005774
IEA
GOA Databasevacuolar membrane
GO:0005775
NAS
Gene Ontologyvacuolar lumen

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029071 Ubiquitin-like domain superfamily
IPR004241 Autophagy protein Atg8 ubiquitin-like
Mapman id Description
19.3.3.4.1 Protein homeostasis.autophagy.phagophore expansion.ATG8-phosphatidylethanolamine conjugation system.ubiquitin-fold protein (ATG8)