Gene: AT3G13400

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G13400
  • Transcript Identifier AT3G13400.1
  • Gene Type Coding gene
  • Location Chr3 : 4355257-4357305 : positive

Gene Family Information

  • ID HOM05D000201
  • #Genes/#Species 1953/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G13400.1
  • symbol sks13
  • full_name SKU5 similar 13
  • uniprot Q9LJF1

Descriptions

  • Description SKU5 similar 13
  • Computational description SKU5 similar 13 (sks13); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 14 (TAIR:AT1G55560.1); Has 5231 Blast hits to 5185 proteins in 974 species: Archae - 4; Bacteria - 1633; Metazoa - 272; Fungi - 1906; Plants - 1265; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005507
IEA
Gene Ontologycopper ion binding
GO:0005507
IEA
InterProcopper ion binding
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IBA
Gene Ontologyoxidoreductase activity1
GO:0016491
IEA
InterProoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008972 Cupredoxin
IPR045087 Multicopper oxidase
IPR011707 Multicopper oxidase, N-termianl
IPR001117 Multicopper oxidase, type 1
IPR034271 Ascorbate oxidase homologue, second cupredoxin domain
IPR011706 Multicopper oxidase, C-terminal
Mapman id Description
50.1.10 Enzyme classification.EC_1 oxidoreductases.EC_1.10 oxidoreductase acting on diphenol or related substance as donor