Gene: AT3G12820

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G12820
  • Transcript Identifier AT3G12820.1
  • Gene Type Coding gene
  • Location Chr3 : 4074328-4075614 : negative

Gene Family Information

  • ID HOM05D000008
  • #Genes/#Species 9932/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G12820.1
  • symbol MYB10
  • Alias AtMYB10,myb domain protein 10
  • uniprot Q9LTV4

Descriptions

  • Description myb domain protein 10
  • Computational description myb domain protein 10 (MYB10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of transcription, DNA-dependent; EXPRESSED IN: shoot apex, hypocotyl, sepal, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 58 (TAIR:AT1G16490.1); Has 9041 Blast hits to 8235 proteins in 510 species: Archae - 0; Bacteria - 0; Metazoa - 871; Fungi - 478; Plants - 5872; Viruses - 6; Other Eukaryotes - 1814 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010043
ISS
Gene Ontologyresponse to zinc ion
GO:0046686
ISS
Gene Ontologyresponse to cadmium ion
GO:0010468
IMP
Gene Ontologyregulation of gene expression1
GO:1990532
IMP
Gene Ontologystress response to nickel ion1
GO:1990641
IMP, IEP
Gene Ontologyresponse to iron ion starvation1
GO:0009646
IEP
Gene Ontologyresponse to absence of light2
GO:0009723
IEP
Gene Ontologyresponse to ethylene2
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity3
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR009057 Homeobox-like domain superfamily
IPR017930 Myb domain
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)