Gene: AT3G11710

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G11710
  • Transcript Identifier AT3G11710.1
  • Gene Type Coding gene
  • Location Chr3 : 3702359-3705613 : negative

Gene Family Information

  • ID HOM05D001472
  • #Genes/#Species 431/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G11710.1
  • symbol ATKRS-1
  • uniprot Q9ZPI1

Descriptions

  • Description lysyl-tRNA synthetase 1
  • Computational description lysyl-tRNA synthetase 1 (ATKRS-1); FUNCTIONS IN: ATP binding, lysine-tRNA ligase activity; INVOLVED IN: lysyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Lysyl-tRNA synthetase, class II, C-terminal (InterPro:IPR018149), Lysyl-tRNA synthetase, class II (InterPro:IPR002313), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Lysyl-tRNA synthetase, class II (TAIR:AT3G13490.1); Has 24040 Blast hits to 20328 proteins in 2969 species: Archae - 380; Bacteria - 16623; Metazoa - 629; Fungi - 774; Plants - 209; Viruses - 0; Other Eukaryotes - 5425 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006430
IEA
GOA Databaselysyl-tRNA aminoacylation
GO:0006430
IBA
Gene Ontologylysyl-tRNA aminoacylation1
GO:0006430
IEA
InterProlysyl-tRNA aminoacylation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004824
IEA
GOA Databaselysine-tRNA ligase activity
GO:0004824
IDA
IBA
Gene Ontologylysine-tRNA ligase activity1 2
GO:0004824
IEA
InterProlysine-tRNA ligase activity
GO:0016874
IEA
GOA Databaseligase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0000049
IBA
Gene OntologytRNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma3
GO:0005829
IDA
IEA
GOA Databasecytosol
GO:0005829
HDA
IBA
Gene Ontologycytosol1 4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002313 Lysine-tRNA ligase, class II
IPR018149 Lysyl-tRNA synthetase, class II, C-terminal
IPR044136 Lysine-tRNA ligase, class II, N-terminal
IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II
IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
17.2.13 Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase