Gene: AT3G10720
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G10720
- Transcript Identifier AT3G10720.2
- Gene Type Coding gene
- Location Chr3 : 3354639-3357581 : negative
Gene Family Information
- ID HOM05D000036
- #Genes/#Species 5053/97
- Phylogenetic origin
- ID ORTHO05D001038
- #Genes/#Species 512/91
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G10720.2
- uniprot Q94CB1
Descriptions
- Description Plant invertase/pectin methylesterase inhibitor superfamily
- Computational description Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G04970.1); Has 2403 Blast hits to 2363 proteins in 309 species: Archae - 6; Bacteria - 557; Metazoa - 1; Fungi - 195; Plants - 1619; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
- Computational description Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G04970.1); Has 4750 Blast hits to 3228 proteins in 426 species: Archae - 6; Bacteria - 642; Metazoa - 199; Fungi - 573; Plants - 2288; Viruses - 376; Other Eukaryotes - 666 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042545 | IEA | Gene Ontology | cell wall modification | |
| GO:0042545 | IEA | InterPro | cell wall modification | |
| GO:0045490 | IEA | Gene Ontology | pectin catabolic process | |
| GO:0043086 | IEA | GOA Database | negative regulation of catalytic activity | |
| GO:0071555 | IEA | GOA Database | cell wall organization |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030599 | IEA | GOA Database | pectinesterase activity | |
| GO:0030599 | IBA | Gene Ontology | pectinesterase activity | 1 |
| GO:0030599 | IEA | InterPro | pectinesterase activity | |
| GO:0046910 | IBA | Gene Ontology | pectinesterase inhibitor activity | 1 |
| GO:0045330 | IEA | GOA Database | aspartyl esterase activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0004857 | IEA | GOA Database | enzyme inhibitor activity | |
| GO:0004857 | IEA | InterPro | enzyme inhibitor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | IEA | GOA Database | extracellular region | |
| GO:0005576 | ISM | Gene Ontology | extracellular region | |
| GO:0005618 | IEA | GOA Database | cell wall |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.3.1.2.1 | Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase |