Gene: AT3G07170

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G07170
  • Transcript Identifier AT3G07170.1
  • Gene Type Coding gene
  • Location Chr3 : 2280428-2282097 : positive

Gene Family Information

  • ID HOM05D003904
  • #Genes/#Species 178/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G07170.1
  • uniprot Q9SFU7

Descriptions

  • Description Sterile alpha motif (SAM) domain-containing protein
  • Computational description Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 1 (InterPro:IPR021129); BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT5G48680.1); Has 516 Blast hits to 515 proteins in 77 species: Archae - 0; Bacteria - 10; Metazoa - 341; Fungi - 2; Plants - 148; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IMP
Gene OntologyrRNA processing1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016757
ISS
Gene Ontologyglycosyltransferase activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005634
IDA
Gene Ontologynucleus1
GO:0005730
IDA
Gene Ontologynucleolus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001660 Sterile alpha motif domain
IPR013761 Sterile alpha motif/pointed domain superfamily
Mapman id Description
17.1.1.4 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.rRNA processing factor (IRP1)