Gene: AT3G06420

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G06420
  • Transcript Identifier AT3G06420.1
  • Gene Type Coding gene
  • Location Chr3 : 1955219-1956274 : negative

Gene Family Information

  • ID HOM05D000698
  • #Genes/#Species 816/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G06420.1
  • symbol ATG8H
  • full_name autophagy 8h
  • uniprot Q8S925

Descriptions

  • Description Ubiquitin-like superfamily protein
  • Computational description autophagy 8h (ATG8H); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G15580.1); Has 1476 Blast hits to 1474 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 178; Plants - 301; Viruses - 3; Other Eukaryotes - 272 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006995
IBA
Gene Ontologycellular response to nitrogen starvation1
GO:0006914
IEA
GOA Databaseautophagy
GO:0015031
IEA
GOA Databaseprotein transport

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0005774
IEA
GOA Databasevacuolar membrane
GO:0000421
IEA
GOA Databaseautophagosome membrane
GO:0005773
IEA
GOA Databasevacuole
GO:0005874
IEA
GOA Databasemicrotubule
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0016020
IEA
GOA Databasemembrane
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029071 Ubiquitin-like domain superfamily
IPR004241 Autophagy protein Atg8 ubiquitin-like
Mapman id Description
19.3.3.4.1 Protein homeostasis.autophagy.phagophore expansion.ATG8-phosphatidylethanolamine conjugation system.ubiquitin-fold protein (ATG8)