Gene: AT3G06330

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G06330
  • Transcript Identifier AT3G06330.1
  • Gene Type Coding gene
  • Location Chr3 : 1917334-1919709 : positive

Gene Family Information

  • ID HOM05D000958
  • #Genes/#Species 623/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G06330.1
  • uniprot Q9SQT6

Descriptions

  • Description RING/U-box superfamily protein
  • Computational description RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G18760.1); Has 1679 Blast hits to 1517 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 662; Fungi - 120; Plants - 648; Viruses - 4; Other Eukaryotes - 245 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IDA
Gene Ontologyprotein ubiquitination1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0004842
IDA
Gene Ontologyubiquitin-protein transferase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0009507
ISM
Gene Ontologychloroplast
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011016 Zinc finger, RING-CH-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-v-class E3 ligase