Gene: AT3G05890
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G05890
- Transcript Identifier AT3G05890.1
- Gene Type Coding gene
- Location Chr3 : 1758179-1758452 : negative
Gene Family Information
- ID HOM05D001187
- #Genes/#Species 525/89
- Phylogenetic origin
- ID ORTHO05D000993
- #Genes/#Species 526/89
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT3G05890.1
- symbol RCI2B
- full_name RARE-COLD-INDUCIBLE 2B
- uniprot Q9ZNS6
Descriptions
- Description Low temperature and salt responsive protein family
- Computational description RARE-COLD-INDUCIBLE 2B (RCI2B); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0057 (InterPro:IPR000612); BEST Arabidopsis thaliana protein match is: Low temperature and salt responsive protein family (TAIR:AT3G05880.1); Has 1391 Blast hits to 1391 proteins in 471 species: Archae - 0; Bacteria - 653; Metazoa - 37; Fungi - 280; Plants - 382; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009409 | IMP | Gene Ontology | response to cold | 1 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | Os07g0635900 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | Os07g0635900 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Os07g0635900 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | ISS | Gene Ontology | integral component of membrane | 1 |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000612 | Proteolipid membrane potential modulator |
| Mapman id | Description |
|---|---|
| 35.2 | not assigned.not annotate |