Gene: AT3G05710

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G05710
  • Transcript Identifier AT3G05710.1
  • Gene Type Coding gene
  • Location Chr3 : 1685262-1687229 : positive

Gene Family Information

  • ID HOM05D002869
  • #Genes/#Species 242/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G05710.1
  • symbol SYP43
  • Alias ATSYP43
  • uniprot Q9SUJ1

Descriptions

  • Description syntaxin of plants 43
  • Computational description syntaxin of plants 43 (SYP43); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, cellular membrane fusion; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 41 (TAIR:AT5G26980.2); Has 2057 Blast hits to 2057 proteins in 255 species: Archae - 6; Bacteria - 12; Metazoa - 861; Fungi - 474; Plants - 365; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IBA
TAS
Gene Ontologyintracellular protein transport1 2
GO:0015031
IEA
GOA Databaseprotein transport
GO:0006906
IBA
Gene Ontologyvesicle fusion2
GO:0048278
IBA
Gene Ontologyvesicle docking2
GO:1900150
IGI
Gene Ontologyregulation of defense response to fungus3
GO:0009306
IGI
Gene Ontologyprotein secretion3
GO:0007034
IGI
Gene Ontologyvacuolar transport3
GO:0007030
IGI
Gene OntologyGolgi organization3
GO:0061025
TAS
Gene Ontologymembrane fusion1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005484
IEA
GOA DatabaseSNAP receptor activity
GO:0005484
IBA
TAS
Gene OntologySNAP receptor activity1 2
GO:0000149
IBA
Gene OntologySNARE binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0012505
IBA
Gene Ontologyendomembrane system2
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IBA
Gene Ontologyintegral component of membrane2
GO:0005768
IDA
GOA Databaseendosome
GO:0005768
HDA
Gene Ontologyendosome4
GO:0005794
IDA
GOA DatabaseGolgi apparatus
GO:0005794
HDA
ISM
Gene OntologyGolgi apparatus4
GO:0031201
IBA
Gene OntologySNARE complex2
GO:0005802
IDA, HDA
Gene Ontologytrans-Golgi network3 4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006011 Syntaxin, N-terminal domain
IPR010989 SNARE
IPR000727 Target SNARE coiled-coil homology domain
Mapman id Description
22.3.5.1.1.4 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qa-type SNARE components.SYP4-group component