Gene: AT3G05300

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G05300
  • Transcript Identifier AT3G05300.1
  • Gene Type Coding gene
  • Location Chr3 : 1508024-1508487 : negative

Gene Family Information

  • ID HOM05D000538
  • #Genes/#Species 1016/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G05300.1
  • uniprot Q9MA89

Descriptions

  • Description Cytidine/deoxycytidylate deaminase family protein
  • Computational description Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193); BEST Arabidopsis thaliana protein match is: Cytidine/deoxycytidylate deaminase family protein (TAIR:AT5G28050.1); Has 6754 Blast hits to 6754 proteins in 2226 species: Archae - 16; Bacteria - 5092; Metazoa - 26; Fungi - 15; Plants - 111; Viruses - 0; Other Eukaryotes - 1494 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002100
IEA
Gene OntologytRNA wobble adenosine to inosine editing
GO:0002100
IEA
InterProtRNA wobble adenosine to inosine editing
GO:0006152
IBA
Gene Ontologypurine nucleoside catabolic process1
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0006355
ISO
PLAZA Homology (enrichment)regulation of transcription, DNA-templated HOM05D000538

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008251
IEA
Gene OntologytRNA-specific adenosine deaminase activity
GO:0008251
IEA
InterProtRNA-specific adenosine deaminase activity
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0047974
IBA
Gene Ontologyguanosine deaminase activity1
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016193 Cytidine deaminase-like
IPR028883 tRNA-specific adenosine deaminase
Mapman id Description
6.1.5.2 Nucleotide metabolism.purines.catabolism.guanosine deaminase (GSDA)