Gene: AT3G04920

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G04920
  • Transcript Identifier AT3G04920.2
  • Gene Type Coding gene
  • Location Chr3 : 1360989-1361719 : positive

Gene Family Information

  • ID HOM05D001893
  • #Genes/#Species 348/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G04920.2
  • uniprot Q9SS17

Descriptions

  • Description Ribosomal protein S24e family protein
  • Computational description Ribosomal protein S24e family protein; FUNCTIONS IN: structural constituent of ribosome, nucleotide binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S24e (InterPro:IPR001976), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Ribosomal S24e conserved site (InterPro:IPR018098); BEST Arabidopsis thaliana protein match is: Ribosomal protein S24e family protein (TAIR:AT5G28060.1); Has 888 Blast hits to 888 proteins in 327 species: Archae - 80; Bacteria - 0; Metazoa - 406; Fungi - 151; Plants - 124; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
Gene Ontologystructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
IDA, HDA
Gene OntologymRNA binding1 2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042788
IDA
GOA Databasepolysomal ribosome
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
Gene Ontologycytosol3
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome4
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast5
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005730
IDA
GOA Databasenucleolus
GO:0005730
HDA
Gene Ontologynucleolus6
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0022627
IDA
GOA Databasecytosolic small ribosomal subunit
GO:0022627
HDA
Gene Ontologycytosolic small ribosomal subunit7
GO:0005794
RCA
Gene OntologyGolgi apparatus8
GO:0000325
HDA
Gene Ontologyplant-type vacuole9
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012678 Ribosomal protein L23/L15e core domain superfamily
IPR001976 Ribosomal protein S24e
Mapman id Description
17.1.3.1.25 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS24