Gene: AT3G04630

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G04630
  • Transcript Identifier AT3G04630.2
  • Gene Type Coding gene
  • Location Chr3 : 1259231-1260652 : positive

Gene Family Information

  • ID HOM05D000778
  • #Genes/#Species 759/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G04630.2
  • symbol WDL1
  • uniprot Q8GYX9

Descriptions

  • Description WVD2-like 1
  • Computational description WVD2-like 1 (WDL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: circumnutation, root morphogenesis; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT5G28646.2); Has 555 Blast hits to 553 proteins in 81 species: Archae - 0; Bacteria - 12; Metazoa - 128; Fungi - 23; Plants - 316; Viruses - 4; Other Eukaryotes - 72 (source: NCBI BLink).
  • Computational description WVD2-like 1 (WDL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: circumnutation, root morphogenesis; LOCATED IN: cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT5G28646.2); Has 563 Blast hits to 554 proteins in 86 species: Archae - 0; Bacteria - 24; Metazoa - 128; Fungi - 18; Plants - 315; Viruses - 4; Other Eukaryotes - 74 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000226
IEA
Gene Ontologymicrotubule cytoskeleton organization
GO:0000226
IEA
InterPromicrotubule cytoskeleton organization
GO:0010015
IMP
Gene Ontologyroot morphogenesis1
GO:0010031
IMP
Gene Ontologycircumnutation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008017
IEA
Gene Ontologymicrotubule binding
GO:0008017
IEA
InterPromicrotubule binding
GO:0003674
ND
GOA Databasemolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISS
Gene Ontologycytoplasm1
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0005874
IEA
GOA Databasemicrotubule

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044806 Protein WAVE-DAMPENED 2-like
IPR027329 TPX2, C-terminal
Mapman id Description
20.1.5.2 Cytoskeleton organisation.microtubular network.microtubule dynamics.microtubule-stabilizing factor (WDL)