Gene: AT3G03540
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G03540
- Transcript Identifier AT3G03540.1
- Gene Type Coding gene
- Location Chr3 : 846350-848297 : negative
Gene Family Information
- ID HOM05D000804
- #Genes/#Species 734/100
- Phylogenetic origin
- ID ORTHO05D000989
- #Genes/#Species 527/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT3G03540.1
- symbol NPC5
- uniprot Q9S816
Descriptions
- Description non-specific phospholipase C5
- Computational description non-specific phospholipase C5 (NPC5); CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C4 (TAIR:AT3G03530.1); Has 2077 Blast hits to 2037 proteins in 379 species: Archae - 32; Bacteria - 1720; Metazoa - 0; Fungi - 127; Plants - 154; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009395 | IMP IBA | Gene Ontology | phospholipid catabolic process | 1 2 |
| GO:0016036 | IMP | Gene Ontology | cellular response to phosphate starvation | 1 |
| GO:0009247 | IMP | Gene Ontology | glycolipid biosynthetic process | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016788 | IEA | GOA Database | hydrolase activity, acting on ester bonds | |
| GO:0016788 | IEA | InterPro | hydrolase activity, acting on ester bonds | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0004629 | IEA | GOA Database | phospholipase C activity | |
| GO:0004629 | IDA | Gene Ontology | phospholipase C activity | 1 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
| GO:0034480 | IEA | Gene Ontology | phosphatidylcholine phospholipase C activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005829 | IEA | GOA Database | cytosol | |
| GO:0005829 | IDA | Gene Ontology | cytosol | 1 |
| GO:0005886 | ISM | Gene Ontology | plasma membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 5.7.2.3.1 | Lipid metabolism.lipid degradation.phospholipase activities.phospholipase C activities.phospholipase C (nPLC) |