Gene: AT3G02620
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G02620
- Transcript Identifier AT3G02620.2
- Gene Type Coding gene
- Location Chr3 : 560247-561760 : positive
Gene Family Information
- ID HOM05D000941
- #Genes/#Species 642/99
- Phylogenetic origin
- ID ORTHO05D000882
- #Genes/#Species 571/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G02620.2
- uniprot Q9M880
Descriptions
- Description Plant stearoyl-acyl-carrier-protein desaturase family protein
- Computational description Plant stearoyl-acyl-carrier-protein desaturase family protein; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding; INVOLVED IN: oxidation reduction, fatty acid metabolic process, fatty acid biosynthetic process; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Fatty acid desaturase, type 2 (InterPro:IPR005067), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT3G02610.1); Has 952 Blast hits to 944 proteins in 218 species: Archae - 0; Bacteria - 446; Metazoa - 2; Fungi - 0; Plants - 447; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006633 | IEA | GOA Database | fatty acid biosynthetic process | |
| GO:0009960 | ISO | PLAZA Integrative Orthology | endosperm development | AT3G02610 |
| GO:2000014 | ISO | PLAZA Integrative Orthology | regulation of endosperm development | AT3G02610 |
| GO:0055089 | ISO | PLAZA Integrative Orthology | fatty acid homeostasis | AT3G02610 |
| GO:0006636 | ISO | PLAZA Integrative Orthology | unsaturated fatty acid biosynthetic process | AT3G02610 |
| GO:0006631 | IEA | GOA Database | fatty acid metabolic process | |
| GO:0006631 | IBA | Gene Ontology | fatty acid metabolic process | 1 |
| GO:0006631 | IEA | InterPro | fatty acid metabolic process | |
| GO:0006629 | IEA | GOA Database | lipid metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0045300 | IBA IEA | Gene Ontology | acyl-[acyl-carrier-protein] desaturase activity | 1 |
| GO:0045300 | IEA | InterPro | acyl-[acyl-carrier-protein] desaturase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0102786 | IEA | Gene Ontology | stearoyl-[acp] desaturase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0009536 | IEA | GOA Database | plastid | |
| GO:0009570 | IBA | Gene Ontology | chloroplast stroma | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 5.1.7.2 | Lipid metabolism.fatty acid biosynthesis.fatty acid desaturation.delta-9 stearoyl-ACP desaturase |