Gene: AT3G02590
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G02590
- Transcript Identifier AT3G02590.1
- Gene Type Coding gene
- Location Chr3 : 549340-550553 : positive
Gene Family Information
- ID HOM05D003191
- #Genes/#Species 214/97
- Phylogenetic origin
- ID ORTHO05D003656
- #Genes/#Species 211/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT3G02590.1
- uniprot Q9M883
Descriptions
- Description Fatty acid hydroxylase superfamily protein
- Computational description Fatty acid hydroxylase superfamily protein; FUNCTIONS IN: oxidoreductase activity, C-5 sterol desaturase activity, iron ion binding; INVOLVED IN: oxidation reduction, sterol biosynthetic process, fatty acid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol 1 (TAIR:AT3G02580.1); Has 2431 Blast hits to 2426 proteins in 433 species: Archae - 0; Bacteria - 540; Metazoa - 353; Fungi - 499; Plants - 398; Viruses - 0; Other Eukaryotes - 641 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006629 | IEA | GOA Database | lipid metabolic process | |
GO:0008610 | IEA | Gene Ontology | lipid biosynthetic process | |
GO:0008610 | IEA | InterPro | lipid biosynthetic process | |
GO:0016126 | IEA | GOA Database | sterol biosynthetic process | |
GO:0016126 | IBA | Gene Ontology | sterol biosynthetic process | 1 |
GO:0008202 | IEA | GOA Database | steroid metabolic process | |
GO:0006694 | IEA | GOA Database | steroid biosynthetic process |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016491 | IBA IEA | Gene Ontology | oxidoreductase activity | 1 |
GO:0016491 | IEA | InterPro | oxidoreductase activity | |
GO:0005506 | IEA | Gene Ontology | iron ion binding | |
GO:0005506 | IEA | InterPro | iron ion binding | |
GO:0000248 | IBA | Gene Ontology | C-5 sterol desaturase activity | 1 |
GO:0050046 | IEA | Gene Ontology | delta7-sterol 5(6)-desaturase activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
GO:0016020 | IEA | GOA Database | membrane | |
GO:0016020 | IBA | Gene Ontology | membrane | 1 |
GO:0016021 | IEA | GOA Database | integral component of membrane | |
GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane | |
GO:0005789 | IBA | Gene Ontology | endoplasmic reticulum membrane | 1 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR006694 | Fatty acid hydroxylase |
Mapman id | Description |
---|---|
5.5.1.5 | Lipid metabolism.phytosterol biosynthesis.plant sterol pathway.delta7-sterol C-5 desaturase |