Gene: AT3G02080

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G02080
  • Transcript Identifier AT3G02080.1
  • Gene Type Coding gene
  • Location Chr3 : 364138-365161 : negative

Gene Family Information

  • ID HOM05D001912
  • #Genes/#Species 344/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G02080.1
  • uniprot Q9SGA6

Descriptions

  • Description Ribosomal protein S19e family protein
  • Computational description Ribosomal protein S19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S19e, conserved site (InterPro:IPR018277), Ribosomal protein S19e (InterPro:IPR001266); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19e family protein (TAIR:AT5G15520.1); Has 1131 Blast hits to 1131 proteins in 394 species: Archae - 214; Bacteria - 4; Metazoa - 402; Fungi - 148; Plants - 164; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation
GO:0000028
IBA
Gene Ontologyribosomal small subunit assembly1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IBA
Gene OntologyRNA binding1
GO:0003729
IDA
Gene OntologymRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042788
IDA
GOA Databasepolysomal ribosome
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma3
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
Gene Ontologycytosol4
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome5
GO:0005618
IDA
GOA Databasecell wall
GO:0022627
IDA
GOA Databasecytosolic small ribosomal subunit
GO:0022627
HDA
IBA
Gene Ontologycytosolic small ribosomal subunit1 6
GO:0005634
ISM
Gene Ontologynucleus
GO:0009505
HDA
Gene Ontologyplant-type cell wall7

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001266 Ribosomal protein S19e
IPR036390 Winged helix DNA-binding domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
17.1.3.1.21 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS19