Gene: AT2G47420

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G47420
  • Transcript Identifier AT2G47420.1
  • Gene Type Coding gene
  • Location Chr2 : 19457574-19458777 : positive

Gene Family Information

  • ID HOM05D002539
  • #Genes/#Species 267/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G47420.1
  • symbol DIM1A
  • full_name adenosine dimethyl transferase 1A
  • uniprot O22268

Descriptions

  • Description Ribosomal RNA adenine dimethylase family protein
  • Computational description Ribosomal RNA adenine dimethylase family protein; FUNCTIONS IN: rRNA methyltransferase activity, rRNA (adenine-N6,N6-)-dimethyltransferase activity, rRNA (adenine) methyltransferase activity; INVOLVED IN: rRNA modification, rRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine dimethylase (InterPro:IPR011530), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT5G66360.2); Has 9871 Blast hits to 9860 proteins in 3038 species: Archae - 214; Bacteria - 6519; Metazoa - 271; Fungi - 146; Plants - 120; Viruses - 0; Other Eukaryotes - 2601 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0006364
IEA
InterProrRNA processing
GO:0000154
IEA
GOA DatabaserRNA modification
GO:0000154
IEA
InterProrRNA modification
GO:0032259
IEA
GOA Databasemethylation
GO:0031167
IBA
Gene OntologyrRNA methylation1
GO:0051301
IMP
Gene Ontologycell division2
GO:0001708
IMP
Gene Ontologycell fate specification2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008649
IEA
GOA DatabaserRNA methyltransferase activity
GO:0008649
IEA
InterProrRNA methyltransferase activity
GO:0000179
IEA
GOA DatabaserRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0000179
IMP
IBA
Gene OntologyrRNA (adenine-N6,N6-)-dimethyltransferase activity1 2
GO:0000179
IEA
InterProrRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus3
GO:0005730
IEA
GOA Databasenucleolus
GO:0005730
IDA
Gene Ontologynucleolus2
GO:0005759
IBA
Gene Ontologymitochondrial matrix1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm
IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR011530 Ribosomal RNA adenine dimethylase
Mapman id Description
17.1.1.2.1.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.rRNA adenosine dimethylase (DIM1A)