Gene: AT2G43040

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G43040
  • Transcript Identifier AT2G43040.1
  • Gene Type Coding gene
  • Location Chr2 : 17896049-17898524 : negative

Gene Family Information

  • ID HOM05D001130
  • #Genes/#Species 546/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G43040.1
  • symbol NPG1
  • full_name no pollen germination 1
  • uniprot Q8GZN1

Descriptions

  • Description tetratricopeptide repeat (TPR)-containing protein
  • Computational description no pollen germination 1 (NPG1); CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: no pollen germination related 2 (TAIR:AT4G28600.1); Has 573 Blast hits to 561 proteins in 155 species: Archae - 29; Bacteria - 89; Metazoa - 223; Fungi - 37; Plants - 141; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009846
IMP
Gene Ontologypollen germination1
GO:0009555
IGI
Gene Ontologypollen development2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005516
IEA
GOA Databasecalmodulin binding
GO:0005516
IDA
Gene Ontologycalmodulin binding1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0031234
IDA
Gene Ontologyextrinsic component of cytoplasmic side of plasma membrane2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR043376 Protein NPG1-like
IPR019734 Tetratricopeptide repeat
Mapman id Description
35.1 not assigned.annotated