Gene: AT2G42360
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G42360
- Transcript Identifier AT2G42360.1
- Gene Type Coding gene
- Location Chr2 : 17640907-17641617 : positive
Gene Family Information
- ID HOM05D000157
- #Genes/#Species 2371/94
- Phylogenetic origin
- ID ORTHO05D000311
- #Genes/#Species 1141/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT2G42360.1
- uniprot Q9SLC3
Descriptions
- Description RING/U-box superfamily protein
- Computational description RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G42350.1); Has 8862 Blast hits to 8837 proteins in 292 species: Archae - 0; Bacteria - 0; Metazoa - 2202; Fungi - 673; Plants - 4781; Viruses - 60; Other Eukaryotes - 1146 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016567 | IDA IEA | Gene Ontology | protein ubiquitination | 1 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004842 | IDA | Gene Ontology | ubiquitin-protein transferase activity | 1 |
GO:0046872 | IEA | GOA Database | metal ion binding | |
GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016020 | IEA | GOA Database | membrane | |
GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
19.2.2.1.4.3.3.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase |