Gene: AT2G42010

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G42010
  • Transcript Identifier AT2G42010.1
  • Gene Type Coding gene
  • Location Chr2 : 17533018-17537990 : negative

Gene Family Information

  • ID HOM05D000315
  • #Genes/#Species 1462/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G42010.1
  • symbol PLDBETA1
  • Alias PLDBETA
  • uniprot P93733

Descriptions

  • Description phospholipase D beta 1
  • Computational description phospholipase D beta 1 (PLDBETA1); FUNCTIONS IN: phospholipase D activity, protein binding, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, defense response to bacterium, incompatible interaction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase D beta 2 (TAIR:AT4G00240.1); Has 42228 Blast hits to 24253 proteins in 1246 species: Archae - 34; Bacteria - 3967; Metazoa - 15807; Fungi - 8808; Plants - 7882; Viruses - 972; Other Eukaryotes - 4758 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046470
ISO
PLAZA Homology (enrichment)phosphatidylcholine metabolic process HOM05D000315
GO:0016042
IEA
GOA Databaselipid catabolic process
GO:0006629
IEA
GOA Databaselipid metabolic process
GO:0046686
IEP
GOA Databaseresponse to cadmium ion
GO:0009395
IBA
Gene Ontologyphospholipid catabolic process1
GO:0042742
IEP
Gene Ontologydefense response to bacterium2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004630
IDA
ISS, IBA
TAS, IEA
Gene Ontologyphospholipase D activity1 3 4
GO:0005509
ISO
PLAZA Homology (enrichment)calcium ion binding HOM05D000315
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005546
IDA
Gene Ontologyphosphatidylinositol-4,5-bisphosphate binding4
GO:0005515
IPI
Gene Ontologyprotein binding5
GO:0070290
IEA
Gene OntologyN-acylphosphatidylethanolamine-specific phospholipase D activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma6
GO:0005737
IEA
GOA Databasecytoplasm
GO:0016020
IEA
GOA Databasemembrane
GO:0005886
IBA
Gene Ontologyplasma membrane1
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000008 C2 domain
IPR015679 Phospholipase D family
IPR024632 Phospholipase D, C-terminal
IPR001736 Phospholipase D/Transphosphatidylase
IPR035892 C2 domain superfamily
Mapman id Description
5.7.2.4.2 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase D activities.phospholipase D (PLD-beta/gamma)