Gene: AT2G40890

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G40890
  • Transcript Identifier AT2G40890.1
  • Gene Type Coding gene
  • Location Chr2 : 17058291-17060532 : negative

Gene Family Information

  • ID HOM05D000016
  • #Genes/#Species 7260/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G40890.1
  • symbol CYP98A3
  • Alias REF8,REDUCED EPIDERMAL FLUORESCENCE 8
  • full_name cytochrome P450%2C family 98%2C subfamily A%2C polypeptide 3
  • uniprot O22203

Descriptions

  • Description cytochrome P450, family 98, subfamily A, polypeptide 3
  • Computational description cytochrome P450, family 98, subfamily A, polypeptide 3 (CYP98A3); FUNCTIONS IN: monooxygenase activity, p-coumarate 3-hydroxylase activity; INVOLVED IN: coumarin biosynthetic process, lignin biosynthetic process, phenylpropanoid biosynthetic process, flavonoid biosynthetic process; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, microsome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 98, subfamily A, polypeptide 9 (TAIR:AT1G74550.1); Has 33899 Blast hits to 33682 proteins in 1752 species: Archae - 48; Bacteria - 3997; Metazoa - 11870; Fungi - 7164; Plants - 9566; Viruses - 3; Other Eukaryotes - 1251 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009805
IMP
Gene Ontologycoumarin biosynthetic process1
GO:0009813
IMP
Gene Ontologyflavonoid biosynthetic process2
GO:0009809
IMP
TAS
Gene Ontologylignin biosynthetic process2 3
GO:0009699
IMP
Gene Ontologyphenylpropanoid biosynthetic process4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042802
IPI
Gene Ontologyidentical protein binding5
GO:0020037
IEA
Gene Ontologyheme binding
GO:0020037
IEA
InterProheme binding
GO:0016705
IEA
GOA Databaseoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016705
IEA
InterProoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506
IEA
Gene Ontologyiron ion binding
GO:0005506
IEA
InterProiron ion binding
GO:0004497
IEA
GOA Databasemonooxygenase activity
GO:0004497
IDA
Gene Ontologymonooxygenase activity4
GO:0004497
IEA
InterPromonooxygenase activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016709
IBA
Gene Ontologyoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen6
GO:0005515
IPI
Gene Ontologyprotein binding5
GO:0046409
IDA, IMP
Gene Ontologyp-coumarate 3-hydroxylase activity2 4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005739
IDA
GOA Databasemitochondrion
GO:0005739
HDA
Gene Ontologymitochondrion7
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IBA
Gene Ontologymembrane6
GO:0005829
HDA
Gene Ontologycytosol8
GO:0005783
IDA, HDA
Gene Ontologyendoplasmic reticulum5 9
GO:0043231
IDA
Gene Ontologyintracellular membrane-bounded organelle4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001128 Cytochrome P450
IPR036396 Cytochrome P450 superfamily
IPR002401 Cytochrome P450, E-class, group I
Mapman id Description
21.6.1.2 Cell wall organisation.lignin.monolignol biosynthesis.p-coumaroyl shikimate/quinate 3'-hydroxylase (C3'H)