Gene: AT2G40750
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G40750
- Transcript Identifier AT2G40750.1
- Gene Type Coding gene
- Location Chr2 : 17000636-17002354 : negative
Gene Family Information
- ID HOM05D000405
- #Genes/#Species 1246/95
- Phylogenetic origin
- ID ORTHO05D000712
- #Genes/#Species 658/91
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G40750.1
- symbol WRKY54
- Alias ATWRKY54,WRKY DNA-BINDING PROTEIN 54
- uniprot Q93WU8
Descriptions
- Description WRKY DNA-binding protein 54
- Computational description WRKY DNA-binding protein 54 (WRKY54); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 70 (TAIR:AT3G56400.1); Has 3183 Blast hits to 2752 proteins in 165 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3171; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0050832 | IMP | Gene Ontology | defense response to fungus | 1 |
| GO:0006355 | IEA | Gene Ontology | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009873 | IEA | GOA Database | ethylene-activated signaling pathway | |
| GO:0009742 | IEA | GOA Database | brassinosteroid mediated signaling pathway | |
| GO:0006952 | IEA | GOA Database | defense response | |
| GO:2000031 | IMP | Gene Ontology | regulation of salicylic acid mediated signaling pathway | 1 |
| GO:2000022 | IMP | Gene Ontology | regulation of jasmonic acid mediated signaling pathway | 1 |
| GO:0042742 | IMP | Gene Ontology | defense response to bacterium | 1 |
| GO:0010104 | IMP | Gene Ontology | regulation of ethylene-activated signaling pathway | 1 |
| GO:2000070 | IMP | Gene Ontology | regulation of response to water deprivation | 2 |
| GO:1900457 | IMP | Gene Ontology | regulation of brassinosteroid mediated signaling pathway | 2 |
| GO:0090333 | IMP | Gene Ontology | regulation of stomatal closure | 3 |
| GO:0047484 | IMP | Gene Ontology | regulation of response to osmotic stress | 3 |
| GO:0006970 | IEP | Gene Ontology | response to osmotic stress | 3 |
| GO:1900056 | IGI | Gene Ontology | negative regulation of leaf senescence | 4 |
| GO:0009751 | IEP | Gene Ontology | response to salicylic acid | 4 |
| GO:0000302 | IEP | Gene Ontology | response to reactive oxygen species | 4 |
| GO:0031347 | IMP | Gene Ontology | regulation of defense response | 5 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043565 | IEA | GOA Database | sequence-specific DNA binding | |
| GO:0043565 | IEA | InterPro | sequence-specific DNA binding | |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IMP ISS, IBA | Gene Ontology | DNA-binding transcription factor activity | 5 6 |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0000976 | IBA | Gene Ontology | transcription cis-regulatory region binding | 6 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 4 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM, IBA | Gene Ontology | nucleus | 6 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.22.1 | RNA biosynthesis.transcriptional regulation.WRKY transcription factor activity.transcription factor (WRKY) |