Gene: AT2G40620
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G40620
- Transcript Identifier AT2G40620.1
- Gene Type Coding gene
- Location Chr2 : 16954804-16956872 : negative
Gene Family Information
- ID HOM05D000516
- #Genes/#Species 1046/98
- Phylogenetic origin
- ID ORTHO05D000409
- #Genes/#Species 973/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT2G40620.1
- Alias bZIP18,basic leucine-zipper 18
- uniprot O22873
Descriptions
- Description Basic-leucine zipper (bZIP) transcription factor family protein
- Computational description Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G31370.5); Has 1748 Blast hits to 1720 proteins in 178 species: Archae - 0; Bacteria - 19; Metazoa - 312; Fungi - 66; Plants - 1196; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | Gene Ontology | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0033744 | ISO | PLAZA Integrative Orthology | L-methionine:thioredoxin-disulfide S-oxidoreductase activity | Solyc06g048630.3 |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | ISS, IBA | Gene Ontology | DNA-binding transcription factor activity | 1 2 |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0031490 | IDA | Gene Ontology | chromatin DNA binding | 3 |
| GO:0043621 | IPI | Gene Ontology | protein self-association | 4 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 5 |
| GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 6 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 2 3 |
| GO:0048471 | IEA | GOA Database | perinuclear region of cytoplasm | |
| GO:0048471 | IDA | Gene Ontology | perinuclear region of cytoplasm | 4 |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IDA | Gene Ontology | cytoplasm | 5 |
| GO:0005654 | IEA | GOA Database | nucleoplasm | |
| GO:0005654 | IDA | Gene Ontology | nucleoplasm | 5 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.4.1 | RNA biosynthesis.transcriptional regulation.bZIP transcription factor superfamily.transcription factor (bZIP) |