Gene: AT2G39970

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G39970
  • Transcript Identifier AT2G39970.1
  • Gene Type Coding gene
  • Location Chr2 : 16684026-16686392 : negative

Gene Family Information

  • ID HOM05D002885
  • #Genes/#Species 240/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G39970.1
  • symbol PXN
  • Alias APEM3,ABERRANT PEROXISOME MORPHOLOGY 3,PMP38,peroxisomal membrane protein 38
  • full_name peroxisomal NAD carrier
  • uniprot O04200

Descriptions

  • Description Mitochondrial substrate carrier family protein
  • Computational description Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, peroxisomal membrane, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: folate transporter 1 (TAIR:AT5G66380.1); Has 16603 Blast hits to 11434 proteins in 397 species: Archae - 0; Bacteria - 4; Metazoa - 7348; Fungi - 4678; Plants - 2931; Viruses - 0; Other Eukaryotes - 1642 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
Gene Ontologytransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0006862
IEA
GOA Databasenucleotide transport
GO:0006862
IEA
InterPronucleotide transport
GO:0044375
IMP
Gene Ontologyregulation of peroxisome size1
GO:0043132
IMP
Gene OntologyNAD transport2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015297
IEA
GOA Databaseantiporter activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009514
IEA
GOA Databaseglyoxysome
GO:0005777
IEA
GOA Databaseperoxisome
GO:0005777
IDA
Gene Ontologyperoxisome2
GO:0005739
ISM
Gene Ontologymitochondrion
GO:0046861
IEA
GOA Databaseglyoxysomal membrane
GO:0000325
HDA
Gene Ontologyplant-type vacuole3
GO:0005778
IDA
Gene Ontologyperoxisomal membrane4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018108 Mitochondrial substrate/solute carrier
IPR023395 Mitochondrial carrier domain superfamily
IPR044712 NAD/FAD transporter SLC25A32-like
Mapman id Description
24.2.13 Solute transport.carrier-mediated transport.solute transporter (MTCC)