Gene: AT2G39730

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G39730
  • Transcript Identifier AT2G39730.1
  • Gene Type Coding gene
  • Location Chr2 : 16570951-16573345 : negative

Gene Family Information

  • ID HOM05D001467
  • #Genes/#Species 432/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G39730.1
  • symbol RCA
  • uniprot P10896

Descriptions

  • Description rubisco activase
  • Computational description rubisco activase (RCA); FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding; INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium; LOCATED IN: in 11 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73110.1); Has 2406 Blast hits to 2358 proteins in 526 species: Archae - 328; Bacteria - 489; Metazoa - 254; Fungi - 429; Plants - 406; Viruses - 0; Other Eukaryotes - 500 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009416
IEP
Gene Ontologyresponse to light stimulus1
GO:0050790
IEA
GOA Databaseregulation of catalytic activity
GO:0042742
IEP
GOA Databasedefense response to bacterium
GO:0009409
IEP
Gene Ontologyresponse to cold2
GO:0009753
IEP
Gene Ontologyresponse to jasmonic acid3
GO:0010150
IMP
Gene Ontologyleaf senescence3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046863
IDA
IBA
Gene Ontologyribulose-1,5-bisphosphate carboxylase/oxygenase activator activity4 5
GO:0003729
IDA
Gene OntologymRNA binding6
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IDA
IEA
Gene OntologyATP binding4
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0043531
IDA
Gene OntologyADP binding4
GO:0030234
IDA
Gene Ontologyenzyme regulator activity7

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010287
IDA
IEA
GOA Databaseplastoglobule
GO:0009579
IDA
GOA Databasethylakoid
GO:0009579
HDA
IBA
Gene Ontologythylakoid5 8
GO:0009570
IDA
IEA
GOA Databasechloroplast stroma
GO:0009570
HDA
IBA
Gene Ontologychloroplast stroma5 9
GO:0005618
IDA
GOA Databasecell wall
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope10
GO:0009535
IDA
GOA Databasechloroplast thylakoid membrane
GO:0009535
HDA
Gene Ontologychloroplast thylakoid membrane11
GO:0048046
IDA
GOA Databaseapoplast
GO:0048046
HDA
Gene Ontologyapoplast12
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
Gene Ontologynucleus13
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA, HDA
ISM
NAS
Gene Ontologychloroplast14 15
GO:0009505
HDA
Gene Ontologyplant-type cell wall16
GO:0010319
IDA
Gene Ontologystromule2
GO:0005794
HDA
Gene OntologyGolgi apparatus17

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR044960 Ribulose bisphosphate carboxylase/oxygenase activase-like
IPR003959 ATPase, AAA-type, core
Mapman id Description
1.2.1.3.2 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo regulation.ATP-dependent activase (RCA)