Gene: AT2G39720

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G39720
  • Transcript Identifier AT2G39720.2
  • Gene Type Coding gene
  • Location Chr2 : 16567506-16568711 : negative

Gene Family Information

  • ID HOM05D000082
  • #Genes/#Species 3688/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G39720.2
  • symbol RHC2A
  • uniprot O22283

Descriptions

  • Description RING-H2 finger C2A
  • Computational description RING-H2 finger C2A (RHC2A); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Protein of unknown function DUF1117 (InterPro:IPR010543); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G59550.1); Has 8622 Blast hits to 8603 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 2413; Fungi - 807; Plants - 4301; Viruses - 28; Other Eukaryotes - 1073 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IBA
IEA
Gene Ontologyprotein ubiquitination1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IEA
GOA Databaseubiquitin protein ligase activity
GO:0061630
IBA
Gene Ontologyubiquitin protein ligase activity1
GO:0061630
IEA
InterProubiquitin protein ligase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005737
IBA
Gene Ontologycytoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001841 Zinc finger, RING-type
IPR010543 Domain of unknown function DUF1117
IPR039525 E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon
Mapman id Description
19.2.2.1.4.3.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.BTL-subclass ligase