Gene: AT2G39700

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G39700
  • Transcript Identifier AT2G39700.1
  • Gene Type Coding gene
  • Location Chr2 : 16544246-16545434 : negative

Gene Family Information

  • ID HOM05D000114
  • #Genes/#Species 2914/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G39700.1
  • symbol EXPA4
  • Alias ATEXP4,ATEXPA4,expansin A4,ATHEXP ALPHA 1.6
  • uniprot O48818

Descriptions

  • Description expansin A4
  • Computational description expansin A4 (EXPA4); CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A16 (TAIR:AT3G55500.1); Has 2158 Blast hits to 2155 proteins in 155 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 41; Plants - 2085; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009664
IEA
Gene Ontologyplant-type cell wall organization
GO:0009664
IEA
InterProplant-type cell wall organization
GO:0009826
NAS
Gene Ontologyunidimensional cell growth1
GO:0009828
NAS
Gene Ontologyplant-type cell wall loosening1
GO:0006949
IEP
Gene Ontologysyncytium formation2
GO:0071555
IEA
GOA Databasecell wall organization

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005576
IEA
InterProextracellular region
GO:0009505
IDA
GOA Databaseplant-type cell wall
GO:0009505
HDA
Gene Ontologyplant-type cell wall3
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma4
GO:0016020
IEA
GOA Databasemembrane
GO:0005618
IEA
GOA Databasecell wall
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002963 Expansin
IPR007112 Expansin/pollen allergen, DPBB domain
IPR036908 RlpA-like domain superfamily
IPR007118 Expansin/Lol pI
IPR036749 Expansin, cellulose-binding-like domain superfamily
IPR007117 Expansin, cellulose-binding-like domain
IPR009009 RlpA-like protein, double-psi beta-barrel domain
Mapman id Description
21.4.2.1 Cell wall organisation.cell wall proteins.expansin activities.alpha-class expansin