Gene: AT2G38820

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G38820
  • Transcript Identifier AT2G38820.2
  • Gene Type Coding gene
  • Location Chr2 : 16222271-16223393 : positive

Gene Family Information

  • ID HOM05D000334
  • #Genes/#Species 1409/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G38820.2
  • uniprot F4ITY1

Descriptions

  • Description DNA-directed RNA polymerase subunit beta-beta protein, putative (DUF506)
  • Computational description Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT3G22970.1); Has 400 Blast hits to 398 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 398; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
  • Computational description Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT3G22970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process
GO:0032774
IEA
GOA DatabaseRNA biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function
GO:0003899
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006502 Protein of unknown function PDDEXK-like
Mapman id Description
35.1 not assigned.annotated