Gene: AT2G38540

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G38540
  • Transcript Identifier AT2G38540.1
  • Gene Type Coding gene
  • Location Chr2 : 16130418-16130893 : positive

Gene Family Information

  • ID HOM05D000275
  • #Genes/#Species 1588/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G38540.1
  • symbol LP1
  • Alias ATLTP1,ARABIDOPSIS THALIANA LIPID TRANSFER PROTEIN 1,LTP1,LIPID TRANSFER PROTEIN 1
  • uniprot Q42589

Descriptions

  • Description lipid transfer protein 1
  • Computational description lipid transfer protein 1 (LP1); FUNCTIONS IN: calmodulin binding; INVOLVED IN: lipid transport; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 2 (TAIR:AT2G38530.1); Has 1149 Blast hits to 1148 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1145; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006869
IEA
GOA Databaselipid transport
GO:0006869
TAS
Gene Ontologylipid transport1
GO:0006869
IEA
InterProlipid transport
GO:0071555
IEA
GOA Databasecell wall organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008289
IEA
GOA Databaselipid binding
GO:0008289
IEA
InterProlipid binding
GO:0005516
IDA
Gene Ontologycalmodulin binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
IEA
GOA Databasecell wall
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0009534
IDA
GOA Databasechloroplast thylakoid
GO:0009534
HDA
Gene Ontologychloroplast thylakoid2
GO:0048046
IDA
GOA Databaseapoplast
GO:0048046
HDA
Gene Ontologyapoplast3
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane4
GO:0016020
IBA
Gene Ontologymembrane5
GO:0009505
IDA
Gene Ontologyplant-type cell wall6
GO:0005794
HDA
Gene OntologyGolgi apparatus7
GO:0099503
HDA
Gene Ontologysecretory vesicle8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016140 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily
IPR000528 Plant non-specific lipid-transfer protein/Par allergen
Mapman id Description
35.1 not assigned.annotated