Gene: AT2G35000

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G35000
  • Transcript Identifier AT2G35000.1
  • Gene Type Coding gene
  • Location Chr2 : 14751809-14752945 : negative

Gene Family Information

  • ID HOM05D000157
  • #Genes/#Species 2371/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G35000.1
  • symbol ATL9
  • full_name Arabidopsis toxicos en levadura 9
  • uniprot O64763

Descriptions

  • Description RING/U-box superfamily protein
  • Computational description RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: defense response to fungus, response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, hypocotyl, root, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G35330.1); Has 9249 Blast hits to 9225 proteins in 281 species: Archae - 0; Bacteria - 6; Metazoa - 2393; Fungi - 760; Plants - 4794; Viruses - 39; Other Eukaryotes - 1257 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IDA
IEA
Gene Ontologyprotein ubiquitination1
GO:0010200
IEP
Gene Ontologyresponse to chitin2
GO:0050832
IMP
Gene Ontologydefense response to fungus2
GO:0006952
IEA
GOA Databasedefense response

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IDA
Gene Ontologyubiquitin-protein transferase activity1
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase