Gene: AT2G33380

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G33380
  • Transcript Identifier AT2G33380.1
  • Gene Type Coding gene
  • Location Chr2 : 14144984-14146374 : negative

Gene Family Information

  • ID HOM05D001064
  • #Genes/#Species 574/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G33380.1
  • symbol RD20
  • Alias AtCLO3,Arabidopsis thaliana caleosin 3,AtRD20,CLO-3,caleosin 3,CLO3,caleosin 3,PXG3,peroxygenase 3
  • full_name RESPONSIVE TO DESSICATION 20
  • uniprot O22788

Descriptions

  • Description Caleosin-related family protein
  • Computational description RESPONSIVE TO DESSICATION 20 (RD20); FUNCTIONS IN: lipoxygenase activity, calcium ion binding; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast membrane, microsome, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Caleosin related (InterPro:IPR007736); BEST Arabidopsis thaliana protein match is: seed gene 1 (TAIR:AT4G26740.1); Has 344 Blast hits to 339 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 60; Plants - 279; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1902609
IMP
Gene Ontology(R)-2-hydroxy-alpha-linolenic acid biosynthetic process1
GO:2000377
IMP
Gene Ontologyregulation of reactive oxygen species metabolic process2
GO:0050832
IDA
Gene Ontologydefense response to fungus1
GO:0010118
IMP
Gene Ontologystomatal movement3
GO:0031407
IDA
Gene Ontologyoxylipin metabolic process4
GO:0009751
IEP
Gene Ontologyresponse to salicylic acid4
GO:0009620
IEP
Gene Ontologyresponse to fungus4
GO:0009737
IEP
Gene Ontologyresponse to abscisic acid5
GO:0009651
IEP
Gene Ontologyresponse to salt stress5
GO:0009409
IEP
Gene Ontologyresponse to cold5
GO:0009269
IEP
TAS
Gene Ontologyresponse to desiccation5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1990137
IEA
GOA Databaseplant seed peroxidase activity
GO:1990137
IDA
Gene Ontologyplant seed peroxidase activity4
GO:0005509
IDA
IBA
TAS
Gene Ontologycalcium ion binding5 6
GO:0004497
IBA
Gene Ontologymonooxygenase activity6
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016491
IEA
GOA Databaseoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0005783
HDA
Gene Ontologyendoplasmic reticulum7
GO:0005811
IEA
GOA Databaselipid droplet
GO:0031969
IEA
GOA Databasechloroplast membrane
GO:0031969
IDA
Gene Ontologychloroplast membrane4
GO:0005773
IDA
GOA Databasevacuole
GO:0043231
IEA
GOA Databaseintracellular membrane-bounded organelle
GO:0043231
IDA
Gene Ontologyintracellular membrane-bounded organelle4
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IEA
GOA Databasechloroplast
GO:0016020
IEA
GOA Databasemembrane
GO:0012511
IDA
Gene Ontologymonolayer-surrounded lipid storage body1
GO:0000325
HDA
Gene Ontologyplant-type vacuole8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007736 Caleosin-related
Mapman id Description
5.9.3 Lipid metabolism.lipid droplet-associated activities.peroxygenase (CALEOSIN/CLO/PXG)