Gene: AT2G30210
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G30210
- Transcript Identifier AT2G30210.1
- Gene Type Coding gene
- Location Chr2 : 12887735-12889827 : negative
Gene Family Information
- ID HOM05D000080
- #Genes/#Species 3730/98
- Phylogenetic origin
- ID ORTHO05D000053
- #Genes/#Species 2731/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT2G30210.1
- symbol LAC3
- uniprot Q56YT0
Descriptions
- Description laccase 3
- Computational description laccase 3 (LAC3); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: hypocotyl, fruit, root, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 13 (TAIR:AT5G07130.1); Has 11124 Blast hits to 9161 proteins in 1586 species: Archae - 42; Bacteria - 5039; Metazoa - 506; Fungi - 3547; Plants - 1577; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0046274 | IEA | GOA Database | lignin catabolic process | |
GO:0046274 | IEA | InterPro | lignin catabolic process |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005507 | IEA | Gene Ontology | copper ion binding | |
GO:0005507 | IEA | InterPro | copper ion binding | |
GO:0052716 | IEA | Gene Ontology | hydroquinone:oxygen oxidoreductase activity | |
GO:0052716 | IEA | InterPro | hydroquinone:oxygen oxidoreductase activity | |
GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
GO:0016491 | IBA | Gene Ontology | oxidoreductase activity | 1 |
GO:0016491 | IEA | InterPro | oxidoreductase activity | |
GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005576 | IEA | GOA Database | extracellular region | |
GO:0005576 | ISM | Gene Ontology | extracellular region | |
GO:0048226 | IDA | Gene Ontology | Casparian strip | 2 |
GO:0048046 | IEA | GOA Database | apoplast | |
GO:0048046 | IEA | InterPro | apoplast |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR034285 | Laccase, second cupredoxin domain |
IPR008972 | Cupredoxin |
IPR011706 | Multicopper oxidase, C-terminal |
IPR001117 | Multicopper oxidase, type 1 |
IPR011707 | Multicopper oxidase, N-termianl |
IPR034288 | Laccase, first cupredoxin domain |
IPR034289 | Laccase, third cupredoxin domain |
IPR045087 | Multicopper oxidase |
IPR017761 | Laccase |
Mapman id | Description |
---|---|
50.1.10 | Enzyme classification.EC_1 oxidoreductases.EC_1.10 oxidoreductase acting on diphenol or related substance as donor |