Gene: AT2G29960

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G29960
  • Transcript Identifier AT2G29960.1
  • Gene Type Coding gene
  • Location Chr2 : 12769183-12770528 : negative

Gene Family Information

  • ID HOM05D000144
  • #Genes/#Species 2569/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G29960.1
  • symbol CYP5
  • Alias ATCYP5,ARABIDOPSIS THALIANA CYCLOPHILIN 5,CYP19-4,CYCLOPHILIN 19-4
  • uniprot Q8LDP4

Descriptions

  • Description cyclophilin 5
  • Computational description cyclophilin 5 (CYP5); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: cytosol, Golgi stack, endoplasmic reticulum, membrane fraction, multivesicular body; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 7 (TAIR:AT5G58710.1); Has 16420 Blast hits to 16390 proteins in 2652 species: Archae - 108; Bacteria - 6810; Metazoa - 2915; Fungi - 1388; Plants - 1273; Viruses - 4; Other Eukaryotes - 3922 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000413
IEA
GOA Databaseprotein peptidyl-prolyl isomerization
GO:0000413
IBA
Gene Ontologyprotein peptidyl-prolyl isomerization1
GO:0000413
IEA
InterProprotein peptidyl-prolyl isomerization
GO:0006457
IEA
GOA Databaseprotein folding
GO:0006457
IBA
Gene Ontologyprotein folding1
GO:0061083
IDA
Gene Ontologyregulation of protein refolding2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003755
IEA
GOA Databasepeptidyl-prolyl cis-trans isomerase activity
GO:0003755
IDA
IBA
Gene Ontologypeptidyl-prolyl cis-trans isomerase activity1 2
GO:0003755
IEA
InterPropeptidyl-prolyl cis-trans isomerase activity
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0016018
IBA
Gene Ontologycyclosporin A binding1
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IBA
Gene Ontologycytoplasm1
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0005783
IDA, HDA
Gene Ontologyendoplasmic reticulum3 4
GO:0005576
IEA
GOA Databaseextracellular region
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IDA
Gene Ontologymembrane2
GO:0043231
IBA
Gene Ontologyintracellular membrane-bounded organelle1
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005777
HDA
Gene Ontologyperoxisome5
GO:0099503
HDA
Gene Ontologysecretory vesicle6
GO:0005794
RCA
Gene OntologyGolgi apparatus7
GO:0005795
IDA
Gene OntologyGolgi stack4
GO:0005771
IDA
Gene Ontologymultivesicular body4
GO:0005829
IDA
Gene Ontologycytosol2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
IPR029000 Cyclophilin-like domain superfamily
IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase
Mapman id Description
18.13.1 Protein modification.protein folding.protein folding catalyst (Cyclophilin)