Gene: AT2G29900

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G29900
  • Transcript Identifier AT2G29900.1
  • Gene Type Coding gene
  • Location Chr2 : 12749837-12751030 : positive

Gene Family Information

  • ID HOM05D002946
  • #Genes/#Species 234/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G29900.1
  • symbol PS2
  • uniprot Q9SIK7

Descriptions

  • Description Presenilin-2
  • Computational description Presenilin-2 (PS2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22A, presenilin (InterPro:IPR001108); BEST Arabidopsis thaliana protein match is: Presenilin-1 (TAIR:AT1G08700.1); Has 475 Blast hits to 452 proteins in 108 species: Archae - 2; Bacteria - 0; Metazoa - 334; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016485
IEA
Gene Ontologyprotein processing
GO:0016485
IEA
InterProprotein processing
GO:0007219
IEA
GOA DatabaseNotch signaling pathway

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004190
IEA
Gene Ontologyaspartic-type endopeptidase activity
GO:0004190
IEA
InterProaspartic-type endopeptidase activity
GO:0004175
IBA
Gene Ontologyendopeptidase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0016020
IEA
GOA Databasemembrane
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0005887
IBA
Gene Ontologyintegral component of plasma membrane1
GO:0005634
IBA
Gene Ontologynucleus1
GO:0043231
IDA
Gene Ontologyintracellular membrane-bounded organelle2
GO:0005798
IDA
Gene OntologyGolgi-associated vesicle2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006639 Presenilin/signal peptide peptidase
IPR001108 Peptidase A22A, presenilin
IPR042524 Presenilin, C-terminal
Mapman id Description
18.11.1.5.1 Protein modification.targeting peptide maturation.endomembrane system.gamma secretase complex.catalytic component PS