Gene: AT2G28315
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G28315
- Transcript Identifier AT2G28315.1
- Gene Type Coding gene
- Location Chr2 : 12088896-12090570 : positive
Gene Family Information
- ID HOM05D000587
- #Genes/#Species 947/100
- Phylogenetic origin
- ID ORTHO05D001561
- #Genes/#Species 389/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT2G28315.1
- uniprot F4IHS9
Descriptions
- Description Nucleotide/sugar transporter family protein
- Computational description Nucleotide/sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G06890.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008643 | IEA | GOA Database | carbohydrate transport | |
| GO:1900030 | IGI | Gene Ontology | regulation of pectin biosynthetic process | 1 |
| GO:0015790 | IDA | Gene Ontology | UDP-xylose transmembrane transport | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005338 | IBA | Gene Ontology | nucleotide-sugar transmembrane transporter activity | 3 |
| GO:0015297 | IEA | GOA Database | antiporter activity | |
| GO:0015297 | IDA IBA | Gene Ontology | antiporter activity | 2 3 |
| GO:0005464 | IDA IBA | Gene Ontology | UDP-xylose transmembrane transporter activity | 2 3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
| GO:0005783 | IDA | Gene Ontology | endoplasmic reticulum | 2 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005794 | IEA | GOA Database | Golgi apparatus | |
| GO:0005794 | IDA IBA | Gene Ontology | Golgi apparatus | 2 3 |
| GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane | |
| GO:0000139 | IEA | GOA Database | Golgi membrane | |
| GO:0005886 | ISM | Gene Ontology | plasma membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004853 | Sugar phosphate transporter domain |
| Mapman id | Description |
|---|---|
| 24.2.1.1.3 | Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.nucleotide sugar transporter (URGT/UXT) |