Gene: AT2G27500

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G27500
  • Transcript Identifier AT2G27500.1
  • Gene Type Coding gene
  • Location Chr2 : 11752364-11753844 : negative

Gene Family Information

  • ID HOM05D000020
  • #Genes/#Species 6649/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G27500.1
  • uniprot Q9ZQG9

Descriptions

  • Description Glycosyl hydrolase superfamily protein
  • Computational description Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT1G32860.1); Has 2143 Blast hits to 2127 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 12; Plants - 2120; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
Gene Ontologycarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0008152
IEA
GOA Databasemetabolic process
GO:0006952
IEA
GOA Databasedefense response
GO:0071555
IEA
GOA Databasecell wall organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0042973
IEA
Gene Ontologyglucan endo-1,3-beta-D-glucosidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
Gene Ontologynucleus1
GO:0031225
IEA
GOA Databaseanchored component of membrane
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0016020
IEA
GOA Databasemembrane
GO:0005737
IDA
IEA
GOA Databasecytoplasm
GO:0005737
HDA
Gene Ontologycytoplasm1
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005618
IEA
GOA Databasecell wall
GO:0046658
HDA
IBA
Gene Ontologyanchored component of plasma membrane2 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044965 Glycoside hydrolase family 17, plant
IPR017853 Glycoside hydrolase superfamily
IPR000490 Glycoside hydrolase family 17
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase