Gene: AT2G24740

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G24740
  • Transcript Identifier AT2G24740.1
  • Gene Type Coding gene
  • Location Chr2 : 10529690-10531957 : negative

Gene Family Information

  • ID HOM05D000268
  • #Genes/#Species 1624/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G24740.1
  • symbol SDG21
  • Alias SUVH8,SU(VAR)3-9 HOMOLOG 8
  • uniprot Q9C5P0

Descriptions

  • Description SET domain group 21
  • Computational description SET domain group 21 (SDG21); FUNCTIONS IN: histone methyltransferase activity; INVOLVED IN: regulation of gene expression, epigenetic; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), AT hook, DNA-binding motif (InterPro:IPR017956), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 7 (TAIR:AT1G17770.1); Has 4288 Blast hits to 4094 proteins in 395 species: Archae - 0; Bacteria - 274; Metazoa - 2162; Fungi - 458; Plants - 1048; Viruses - 4; Other Eukaryotes - 342 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006325
IEA
GOA Databasechromatin organization
GO:0034968
IEA
Gene Ontologyhistone lysine methylation
GO:0034968
IEA
InterProhistone lysine methylation
GO:0016571
IEA
GOA Databasehistone methylation
GO:0032259
IEA
GOA Databasemethylation
GO:0048366
IMP
Gene Ontologyleaf development1
GO:0008361
IMP
Gene Ontologyregulation of cell size1
GO:0040029
TAS
Gene Ontologyregulation of gene expression, epigenetic2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0018024
IEA
Gene Ontologyhistone-lysine N-methyltransferase activity
GO:0018024
IEA
InterProhistone-lysine N-methyltransferase activity
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IEA
InterProprotein binding
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0042054
ISS
Gene Ontologyhistone methyltransferase activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005634
IEA
InterPronucleus
GO:0005694
IEA
GOA Databasechromosome
GO:0000775
IEA
GOA Databasechromosome, centromeric region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036987 SRA-YDG superfamily
IPR003105 SRA-YDG
IPR001214 SET domain
IPR015947 PUA-like superfamily
IPR007728 Pre-SET domain
Mapman id Description
50.2.1 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group