Gene: AT2G24640

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G24640
  • Transcript Identifier AT2G24640.1
  • Gene Type Coding gene
  • Location Chr2 : 10475613-10479341 : negative

Gene Family Information

  • ID HOM05D000344
  • #Genes/#Species 1371/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G24640.1
  • symbol UBP19
  • uniprot Q9SJA1

Descriptions

  • Description ubiquitin-specific protease 19
  • Computational description ubiquitin-specific protease 19 (UBP19); FUNCTIONS IN: cysteine-type endopeptidase activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 18 (TAIR:AT4G31670.1); Has 10197 Blast hits to 8718 proteins in 376 species: Archae - 10; Bacteria - 271; Metazoa - 4969; Fungi - 1754; Plants - 1124; Viruses - 12; Other Eukaryotes - 2057 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016579
IBA
IEA
Gene Ontologyprotein deubiquitination1
GO:0016579
IEA
InterProprotein deubiquitination
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006511
IEA
Gene Ontologyubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004843
IBA
IEA
Gene Ontologythiol-dependent deubiquitinase1
GO:0004843
IEA
InterProthiol-dependent deubiquitinase
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0008234
IEA
GOA Databasecysteine-type peptidase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0004197
IBA
Gene Ontologycysteine-type endopeptidase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005829
IBA
Gene Ontologycytosol1
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR002893 Zinc finger, MYND-type
IPR038765 Papain-like cysteine peptidase superfamily
Mapman id Description
19.2.3.1.1.6 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP15-21)