Gene: AT2G23770
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G23770
- Transcript Identifier AT2G23770.1
- Gene Type Coding gene
- Location Chr2 : 10120242-10122080 : negative
Gene Family Information
- ID HOM05D000225
- #Genes/#Species 1826/96
- Phylogenetic origin
- ID ORTHO05D001817
- #Genes/#Species 351/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT2G23770.1
- symbol LYK4
- Alias AtLYK4
- full_name LysM-containing receptor-like kinase 4
- uniprot O64825
Descriptions
- Description protein kinase family protein / peptidoglycan-binding LysM domain-containing protein
- Computational description protein kinase family protein / peptidoglycan-binding LysM domain-containing protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, cell wall macromolecule catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf whorl, root, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Immunoglobulin-like (InterPro:IPR007110), Protein kinase, catalytic domain (InterPro:IPR000719), Peptidoglycan-binding Lysin subgroup (InterPro:IPR002482), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G33580.1); Has 93408 Blast hits to 92552 proteins in 3130 species: Archae - 75; Bacteria - 9623; Metazoa - 34895; Fungi - 6839; Plants - 28747; Viruses - 328; Other Eukaryotes - 12901 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006952 | IEA | GOA Database | defense response | |
| GO:0006468 | IEA | Gene Ontology | protein phosphorylation | |
| GO:0006468 | IEA | InterPro | protein phosphorylation | |
| GO:0016310 | IEA | GOA Database | phosphorylation | |
| GO:0045087 | IMP, IGI | Gene Ontology | innate immune response | 1 2 |
| GO:0071323 | IEP | Gene Ontology | cellular response to chitin | 1 |
| GO:0071219 | IEP | Gene Ontology | cellular response to molecule of bacterial origin | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004672 | IEA | GOA Database | protein kinase activity | |
| GO:0004672 | IEA | InterPro | protein kinase activity | |
| GO:0016301 | IEA | GOA Database | kinase activity | |
| GO:0016301 | ISS | Gene Ontology | kinase activity | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0008061 | IEA | GOA Database | chitin binding | |
| GO:0008061 | IDA | Gene Ontology | chitin binding | 1 |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0106311 | IEA | Gene Ontology | protein threonine kinase activity | |
| GO:0106310 | IEA | Gene Ontology | protein serine kinase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005886 | IEA | GOA Database | plasma membrane | |
| GO:0005886 | IDA | Gene Ontology | plasma membrane | 1 |
| GO:0009507 | ISM | Gene Ontology | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |