Gene: AT2G23310
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G23310
- Transcript Identifier AT2G23310.1
- Gene Type Coding gene
- Location Chr2 : 9917643-9918913 : positive
Gene Family Information
- ID HOM05D001173
- #Genes/#Species 529/99
- Phylogenetic origin
- ID ORTHO05D001047
- #Genes/#Species 508/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT2G23310.1
- symbol ATRER1C1
- uniprot Q9ZWI7
Descriptions
- Description Rer1 family protein
- Computational description ATRER1C1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: maintenance of protein location; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Retrieval of early ER protein Rer1 (InterPro:IPR004932); BEST Arabidopsis thaliana protein match is: Rer1 family protein (TAIR:AT4G39220.1); Has 510 Blast hits to 509 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 154; Fungi - 146; Plants - 129; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006890 | IBA NAS | Gene Ontology | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | 1 2 |
| GO:0045185 | IGI | Gene Ontology | maintenance of protein location | 1 |
| GO:0006621 | IBA | Gene Ontology | protein retention in ER lumen | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISM | Gene Ontology | plasma membrane | |
| GO:0030173 | IBA | Gene Ontology | integral component of Golgi membrane | 2 |
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004932 | Retrieval of early ER protein Rer1 |
| Mapman id | Description |
|---|---|
| 22.2.2.5 | Vesicle trafficking.Golgi-ER retrograde trafficking.protein cargo receptor activities.membrane protein cargo receptor (RER1) |