Gene: AT2G22690

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G22690
  • Transcript Identifier AT2G22690.1
  • Gene Type Coding gene
  • Location Chr2 : 9649820-9650965 : negative

Gene Family Information

  • ID HOM05D002845
  • #Genes/#Species 243/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G22690.1
  • uniprot Q9ZQ45

Descriptions

  • Description zinc ion binding protein
  • Computational description zinc ion binding; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), CTLH, C-terminal LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), Ran binding protein-like, CRA domain (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: LisH/CRA/RING-U-box domains-containing protein (TAIR:AT4G37880.1); Has 761 Blast hits to 757 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 327; Fungi - 206; Plants - 137; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043161
IEA
GOA Databaseproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043161
IBA
Gene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process1
GO:0043161
IEA
InterProproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IEA
Gene Ontologyubiquitin protein ligase activity
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IBA
Gene Ontologyubiquitin-protein transferase activity1
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0034657
IBA
Gene OntologyGID complex1
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IBA
Gene Ontologycytoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045098 Fyv10 family
IPR037683 Rmd5, degenerated RING (dRING) finger
IPR027370 RING-type zinc-finger, LisH dimerisation motif
IPR006595 CTLH, C-terminal LisH motif
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001841 Zinc finger, RING-type
IPR024964 CTLH/CRA C-terminal to LisH motif domain
IPR013144 CRA domain
Mapman id Description
19.2.1.3.1.2 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.ubiquitin ligase component GID2