Gene: AT2G22040

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G22040
  • Transcript Identifier AT2G22040.1
  • Gene Type Coding gene
  • Location Chr2 : 9374576-9376260 : negative

Gene Family Information

  • ID HOM05D004736
  • #Genes/#Species 155/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G22040.1
  • symbol LST8-2
  • full_name Lethal with Sec Thirteen 8-2
  • uniprot F4IIK6

Descriptions

  • Description Transducin/WD40 repeat-like superfamily protein
  • Computational description Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G18140.1); Has 70174 Blast hits to 28024 proteins in 780 species: Archae - 70; Bacteria - 9367; Metazoa - 29122; Fungi - 15154; Plants - 7922; Viruses - 0; Other Eukaryotes - 8539 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032956
IBA
Gene Ontologyregulation of actin cytoskeleton organization1
GO:0031929
IEA
GOA DatabaseTOR signaling
GO:0031929
IBA
Gene OntologyTOR signaling1
GO:0031929
IEA
InterProTOR signaling

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0080008
ISS
Gene OntologyCul4-RING E3 ubiquitin ligase complex2
GO:0031931
IEA
GOA DatabaseTORC1 complex
GO:0031931
IBA
Gene OntologyTORC1 complex1
GO:0031931
IEA
InterProTORC1 complex
GO:0031932
IEA
GOA DatabaseTORC2 complex
GO:0031932
IBA
Gene OntologyTORC2 complex1
GO:0031932
IEA
InterProTORC2 complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037588 Target of rapamycin complex subunit LST8
IPR001680 WD40 repeat
IPR020472 G-protein beta WD-40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
27.10.1.3 Multi-process regulation.TOR (Target Of Rapamycin) signalling.TORC complex.regulatory component LST8