Gene: AT2G20990

General Information

tid AT2G20990.1
symbol SYTA
Alias ATSYTA,ARABIDOPSIS THALIANA SYNAPTOTAGMIN A,NTMC2T1.1,NTMC2TYPE1.1,SYT1,SYNAPTOTAGMIN 1
uniprot Q9SKR2

Computational description synaptotagmin A (SYTA); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 7 processes; LOCATED IN: endosome, plasma membrane, vacuole, membrane; EXPRESSED IN: whole plant, guard cell, cultured cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G20080.1); Has 7068 Blast hits to 5182 proteins in 270 species: Archae - 0; Bacteria - 0; Metazoa - 4491; Fungi - 774; Plants - 1307; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink).

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006869	IEA	GOA Database	lipid transport
GO:0007029	IMP	Gene Ontology	endoplasmic reticulum organization	1
GO:0061817	IMP	Gene Ontology	endoplasmic reticulum-plasma membrane tethering	1
GO:0006897	IEA	GOA Database	endocytosis
GO:0006897	IMP	Gene Ontology	endocytosis	2
GO:0006612	ISS	Gene Ontology	protein targeting to membrane	3
GO:0001778	IMP	Gene Ontology	plasma membrane repair	4
GO:0009409	IMP	Gene Ontology	response to cold	4
GO:0009615	IPI	Gene Ontology	response to virus	2
GO:0032456	IMP	Gene Ontology	endocytic recycling	2
GO:0046740	IMP	Gene Ontology	transport of virus in host, cell to cell	2
GO:0009612	IMP	Gene Ontology	response to mechanical stimulus	5

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:1901981	IDA	Gene Ontology	phosphatidylinositol phosphate binding	5
GO:0005515	IPI	Gene Ontology	protein binding	6
GO:0046872	IEA	GOA Database	metal ion binding
GO:0008289	IEA	GOA Database	lipid binding
GO:0008289	IEA	InterPro	lipid binding

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0140268	IDA	Gene Ontology	endoplasmic reticulum-plasma membrane contact site	1
GO:0010008	IEA	GOA Database	endosome membrane
GO:0005886	IEA	GOA Database	plasma membrane
GO:0005886	IDA, HDA ISM	Gene Ontology	plasma membrane	4 7
GO:0005768	IEA	GOA Database	endosome
GO:0005768	IDA	Gene Ontology	endosome	2
GO:0032541	IDA	Gene Ontology	cortical endoplasmic reticulum	5
GO:0016021	IEA	GOA Database	integral component of membrane
GO:0016020	IEA	GOA Database	membrane
GO:0005783	IBA	GOA Database	endoplasmic reticulum
GO:0005783	IDA, HDA	Gene Ontology	endoplasmic reticulum	5 8
GO:0000325	HDA	Gene Ontology	plant-type vacuole	9
GO:0009898	IDA	Gene Ontology	cytoplasmic side of plasma membrane	10
GO:0009506	HDA	Gene Ontology	plasmodesma	11

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

Mapman id	Description
5.8.1.2	Lipid metabolism.lipid trafficking.endoplasmic reticulum-plasma membrane lipid transfer.endoplasmic reticulum-plasma membrane tethering protein (SYTa/b/c)