Gene: AT2G20610

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G20610
  • Transcript Identifier AT2G20610.1
  • Gene Type Coding gene
  • Location Chr2 : 8878150-8880298 : negative

Gene Family Information

  • ID HOM05D000658
  • #Genes/#Species 864/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G20610.1
  • symbol SUR1
  • Alias ALF1,ABERRANT LATERAL ROOT FORMATION 1,HLS3,HOOKLESS 3,RTY1,ROOTY 1,RTY,ROOTY
  • full_name SUPERROOT 1
  • uniprot Q9SIV0

Descriptions

  • Description Tyrosine transaminase family protein
  • Computational description SUPERROOT 1 (SUR1); FUNCTIONS IN: S-alkylthiohydroximate lyase activity, carbon-sulfur lyase activity, transaminase activity; INVOLVED IN: regulation of cell growth by extracellular stimulus, glucosinolate biosynthetic process, adventitious root development, indoleacetic acid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT4G28420.2); Has 40950 Blast hits to 40944 proteins in 3034 species: Archae - 1011; Bacteria - 29323; Metazoa - 781; Fungi - 784; Plants - 1326; Viruses - 0; Other Eukaryotes - 7725 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050832
IDA
Gene Ontologydefense response to fungus1
GO:0009058
IEA
GOA Databasebiosynthetic process
GO:0009058
IEA
InterProbiosynthetic process
GO:0006520
IEA
Gene Ontologycellular amino acid metabolic process
GO:0006520
IEA
InterProcellular amino acid metabolic process
GO:0040008
IEA
GOA Databaseregulation of growth
GO:0009684
IMP
Gene Ontologyindoleacetic acid biosynthetic process2
GO:0048830
TAS
Gene Ontologyadventitious root development3
GO:0001560
IMP
Gene Ontologyregulation of cell growth by extracellular stimulus4
GO:0019761
IMP
Gene Ontologyglucosinolate biosynthetic process5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0030170
IEA
Gene Ontologypyridoxal phosphate binding
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0008483
IEA
Gene Ontologytransaminase activity
GO:0008483
IEA
InterProtransaminase activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0005515
IPI
Gene Ontologyprotein binding6
GO:0080108
IMP
Gene OntologyS-alkylthiohydroximate lyase activity5
GO:0016846
IDA
Gene Ontologycarbon-sulfur lyase activity5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005739
HDA
Gene Ontologymitochondrion7
GO:0005829
HDA
Gene Ontologycytosol8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015424 Pyridoxal phosphate-dependent transferase
IPR005958 Tyrosine/nicotianamine aminotransferase
IPR004839 Aminotransferase, class I/classII
IPR015422 Pyridoxal phosphate-dependent transferase, small domain
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
Mapman id Description
30.1.1.8 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.S-alkyl-thiohydroximate lyase
4.2.8.4.1 Amino acid metabolism.degradation.aromatic amino acid.tyrosine.tyrosine aminotransferase (TAT)