Gene: AT2G20100
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G20100
- Transcript Identifier AT2G20100.3
- Gene Type Coding gene
- Location Chr2 : 8678185-8681809 : positive
Gene Family Information
- ID HOM05D000364
- #Genes/#Species 1315/95
- Phylogenetic origin
- ID ORTHO05D000235
- #Genes/#Species 1303/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G20100.3
- uniprot Q7XHI5
Descriptions
- Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein
- Computational description basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G29100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006357 | IBA | Gene Ontology | regulation of transcription by RNA polymerase II | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046983 | IEA | Gene Ontology | protein dimerization activity | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
| GO:0000978 | IBA | Gene Ontology | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 1 |
| GO:0000981 | IBA | Gene Ontology | DNA-binding transcription factor activity, RNA polymerase II-specific | 1 |
| GO:0003677 | IEA | GOA Database | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM, IBA | Gene Ontology | nucleus | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036638 | Helix-loop-helix DNA-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 15.5.30 | RNA biosynthesis.transcriptional regulation.transcription factor (bHLH) |