Gene: AT2G17010

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G17010
  • Transcript Identifier AT2G17010.1
  • Gene Type Coding gene
  • Location Chr2 : 7392914-7395970 : negative

Gene Family Information

  • ID HOM05D000560
  • #Genes/#Species 984/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G17010.1
  • uniprot F4IME2

Descriptions

  • Description Mechanosensitive ion channel family protein
  • Computational description Mechanosensitive ion channel family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Mechanosensitive ion channel family protein (TAIR:AT2G17000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006811
IEA
GOA Databaseion transport
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0006820
IBA
GOA Databaseanion transport
GO:0034220
IEA
GOA Databaseion transmembrane transport
GO:0009859
IMP
Gene Ontologypollen hydration1
GO:0009846
IMP
Gene Ontologypollen germination1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008381
IBA
GOA Databasemechanosensitive ion channel activity
GO:0008381
IDA
Gene Ontologymechanosensitive ion channel activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0005886
IBA
IEA
GOA Databaseplasma membrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005634
ISM
Gene Ontologynucleus
GO:0012505
IEA
GOA Databaseendomembrane system
GO:0012505
IDA
Gene Ontologyendomembrane system1
GO:0090406
IDA
Gene Ontologypollen tube1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016688 Mechanosensitive ion channel MscS-like, plants/fungi
IPR006685 Mechanosensitive ion channel MscS
IPR023408 Mechanosensitive ion channel MscS domain superfamily
IPR010920 LSM domain superfamily
Mapman id Description
24.3.5 Solute transport.channels.mechanosensitive ion channel (MSL)