Gene: AT2G16600
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G16600
- Transcript Identifier AT2G16600.1
- Gene Type Coding gene
- Location Chr2 : 7200862-7201383 : positive
Gene Family Information
- ID HOM05D000144
- #Genes/#Species 2569/100
- Phylogenetic origin
- ID ORTHO05D000392
- #Genes/#Species 1007/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G16600.1
- symbol ROC3
- Alias AtCYP19-1,CYP19,cyclophilin 19
- uniprot Q38900
Descriptions
- Description rotamase CYP 3
- Computational description rotamase CYP 3 (ROC3); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, signal transduction; LOCATED IN: cytosol, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G21130.1); Has 16363 Blast hits to 16328 proteins in 2676 species: Archae - 108; Bacteria - 6734; Metazoa - 2930; Fungi - 1383; Plants - 1279; Viruses - 4; Other Eukaryotes - 3925 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006457 | IEA | GOA Database | protein folding | |
| GO:0006457 | IBA | Gene Ontology | protein folding | 1 |
| GO:0000413 | IEA | GOA Database | protein peptidyl-prolyl isomerization | |
| GO:0000413 | IBA | Gene Ontology | protein peptidyl-prolyl isomerization | 1 |
| GO:0000413 | IEA | InterPro | protein peptidyl-prolyl isomerization | |
| GO:0007165 | ISS | Gene Ontology | signal transduction | 2 |
| GO:0009737 | IEP | Gene Ontology | response to abscisic acid | 3 |
| GO:0009414 | IEP | Gene Ontology | response to water deprivation | 3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003755 | IEA | GOA Database | peptidyl-prolyl cis-trans isomerase activity | |
| GO:0003755 | ISS, IBA | Gene Ontology | peptidyl-prolyl cis-trans isomerase activity | 1 2 |
| GO:0003755 | IEA | InterPro | peptidyl-prolyl cis-trans isomerase activity | |
| GO:0016853 | IEA | GOA Database | isomerase activity | |
| GO:0016018 | IBA | Gene Ontology | cyclosporin A binding | 1 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 4 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | IDA | GOA Database | plasmodesma | |
| GO:0009506 | HDA | Gene Ontology | plasmodesma | 5 |
| GO:0005829 | IDA | GOA Database | cytosol | |
| GO:0005829 | HDA ISS | Gene Ontology | cytosol | 2 6 |
| GO:0009507 | IDA | GOA Database | chloroplast | |
| GO:0009507 | HDA | Gene Ontology | chloroplast | 7 |
| GO:0005886 | IDA | GOA Database | plasma membrane | |
| GO:0005886 | HDA | Gene Ontology | plasma membrane | 8 |
| GO:0005794 | IDA | GOA Database | Golgi apparatus | |
| GO:0005794 | HDA | Gene Ontology | Golgi apparatus | 9 |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | ISM, IBA | Gene Ontology | cytoplasm | 1 |
| GO:0005739 | HDA | Gene Ontology | mitochondrion | 10 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 18.13.1 | Protein modification.protein folding.protein folding catalyst (Cyclophilin) |